Transformer: The Deep Chemistry of Life and Death

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Transformer: The Deep Chemistry of Life and Death

Transformer: The Deep Chemistry of Life and Death

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The reverse Krebs cycle was more widespread on the early Earth before the rise of oxygen. Photosynthesis evolved in the cyanobacteria long after ancient bacteria were converting CO2 and H2 into organic molecules to drive growth. Life started out using the Krebs cycle to convert gases into living cells—the engine of biosynthesis. But modern animals use it for biosynthesis and to generate energy. They can’t spin the cycle in both directions at the same time, so how did they manage?

Even though nonscientists won’t be able to judge whether Lane makes a convincing case, he is periodically quite clear on his goals. Early on, he posits the essential question as “genes first or metabolism first? The thrust of this book is that energy is primal — energy flow shapes genetic information.” Later, he restates the proposition with added whimsy: For anyone, who has "suffered" through memorizing the Krebs/citric acid cycle as presented in biochemistry, this is the rest of the story. For the conventional dogma is so narrow and incomplete that in maybe only a few exceptional courses, does one get an idea of just how much more there is and how that fits in with the whole picture of metabolism.In this compulsively readable book, Lane takes us on a riveting journey, ranging from the flow of energy to new ways of understanding cancer. Lane has come to believe that the structure of cells is less important than what goes on within them, an idea with both theoretical and practical implications. It challenges the accepted theory of life on Earth emerging from a “primordial soup” on the planet’s surface and instead shifts the genesis to undersea thermal vents. It replaces the buildup of genetic mutations as the cause of aging and cancer with the slowing of cellular activity. And it imagines consciousness as the humming electrical fields of cell membranes.

Although I love this book, it does inevitably suffer part way through from the problems of a biology book being read by non-biolog One of the most creative of today's biologists ... this is a book filled with big ideas, many of which are bold instances of lateral thinking. Lane is among the vanguard of researchers asking why the Krebs cycle, the “perfect circle” at the heart of metabolism, remains so elusive more than eighty years after its discovery. Transformeris Lane’s voyage, as a biochemist, to find the inner meaning of the Krebs cycle—and its reverse—why it is still spinning at the heart of life and death today.As we get older, our respiratory performance declines slowly. The rate of respiration is depressed the most at complex I, the largest and most complex of the respiratory complexes. Complex I is the main source of reactive oxygen species (ROS) from mitochondria, and the rate at which these escape (ROS flux) tends to creep up with age. Also, complex 1 is the only entry point for NADH. So the decline in complex I activity with age means that it’s no longer so easy to oxidise NADH. Until now, biology has tended to study the materials that make up the instruments. The time has come to close our eyes and listen to the music.”

Lane explains cellular processes for producing energy particularly cellular respiration in animals. He recounts the history of key discoveries that underlie our understanding of cellular respiration and profiles the scientists involved. He compares cellular respiration with photosynthesis in plants and variants of these processes in microbes, pointing out the similarities and differences. He shows how early forms of the same processes could have initiated life detailing a specific scenario in hydrothermal vents. Lane explores how cellular respiration impacts health and aging. He makes the case that increasing dysfunction in cellular respiration is a primary factor in the increased rate of cancer and Alzheimer’s as we age and in aging itself. Most bacteria and archaea don't use a closed Kreb's cycle; rather they use a forked pathway that allows them to adapt to oxygen availability. Lane suggests that the Ediacaran fauna (500 million years before the Cambrian) had little tissue differentiation and were unable to adapt to changing environmental conditions. In contrast, the bilateral ancestors of the Cambrian fauna had a variety of tissues that could work together to seek metabolic balance. By the dawn of the Cambrian, they were able to deal with oxygen and "Rising oxygen just gave them a turbocharge." A living cell and one that just died have the same DNA. Put differently, both cells have precisely the same information content. Just as the flow of people and goods, rather than the arrangement of the buildings, determines that a city is alive, the fluxes of metabolites and energy characterise a living cell. Modern biology is often solely discussed in terms of information. In "Transformer", Lane argues that metabolism is at least as important. This viewpoint of "follow the goods" is also emphasised on a completely different scale by Vaclav Smil in "How the World Really Works". The third peculiarity is the genetic code itself. There are clues that hint at direct interactions between the letters in DNA and the amino acids of proteins. This means the code is not random. A random piece of RNA will template a small protein, giving it a sequence that is specified by those non-random interactions. If that speeds up metabolism—the Krebs cycle for example—then the random sequence will be selected. And that means there’s no problem with the origin of information in biology. 3. The first animals evolved through a high-wire metabolic balancing act.Vancouver Group. Its requirements for manuscripts, including formats for bibliographic references developed by the U.S. To grasp the Krebs cycle is to fathom the deep coherence of biology. It connects the first photosynthetic bacteria with our own peculiar cells. It links the emergence of consciousness with the inevitability of death. And it puts the subtle differences between individuals in the same grand story as the rise of the living world itself. of Medical Journal Editors (ICMJE) recommends the following citation style, which is the now nearly universally



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